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69 results

The abundance of nitrogen cycle genes and potential greenhouse gas fluxes depends on land use type and little on soil aggregate size

Journal Article
Blaud, A., van der Zaan, B., Menon, M., Lair, G. J., Zhang, D., Huber, P., …Banwart, S. (2018)
The abundance of nitrogen cycle genes and potential greenhouse gas fluxes depends on land use type and little on soil aggregate size. Applied Soil Ecology, 125, 1-11. https://doi.org/10.1016/j.apsoil.2017.11.026
Soil structure is known to influence microbial communities in soil and soil aggregates are the fundamental ecological unit of organisation that support soil functions. However...

Control of Antimicrobial Resistance Requires an Ethical Approach

Journal Article
Parsonage, B., Hagglund, P. K., Keogh, L., Wheelhouse, N., Brown, R. E., & Dancer, S. J. (2017)
Control of Antimicrobial Resistance Requires an Ethical Approach. Frontiers in Microbiology, 8, https://doi.org/10.3389/fmicb.2017.02124
Ethical behavior encompasses actions that benefit both self and society. This means that tackling antimicrobial resistance (AMR) becomes an ethical obligation, because the pro...

Pathogenic outcome following experimental infection of sheep with Chlamydia abortus variant strains LLG and POS

Journal Article
Livingstone, M., Wheelhouse, N., Ensor, H., Rocchi, M., Maley, S., Aitchison, K., …Longbottom, D. (2017)
Pathogenic outcome following experimental infection of sheep with Chlamydia abortus variant strains LLG and POS. PLOS ONE, 12(5), https://doi.org/10.1371/journal.pone.0177653
This study investigated the pathogenesis of two variant strains (LLG and POS) of Chlamydia abortus, in comparison to a typical wild-type strain (S26/3) which is known to be re...

Listeria monocytogenes

Book
Rees, C., Doyle, L., & Taylor, C. (2017)
Listeria monocytogenes. In Foodborne Diseases, 253-276. (3rd). Elsevier. doi:10.1016/b978-0-12-385007-2.00012-7
Listeria monocytogenes was first described in 1923. Before 1982, L. monocytogenes was recognized as a cause of abortions and encephalitis in many animals (particularly cattle ...

Effects of Dry and Wet Sieving of Soil on Identification and Interpretation of Microbial Community Composition

Book Chapter
Blaud, A., Menon, M., van der Zaan, B., Lair, G., & Banwart, S. (2017)
Effects of Dry and Wet Sieving of Soil on Identification and Interpretation of Microbial Community Composition. In D. Sparks, & S. Banwart (Eds.), Quantifying and Managing Soil Functions in Earth's Critical Zone - Combining Experimentation and Mathematical Modelling, (119-142). Academic Press Books. https://doi.org/10.1016/bs.agron.2016.10.006
Soil aggregates are microhabitats for microorganisms, and directly influence microorganisms that live within and are influenced by microorganisms in return. Two methods are us...

Experimental challenge of pregnant cattle with the putative abortifacient Waddlia chondrophila

Journal Article
Wheelhouse, N., Flockhart, A., Aitchison, K., Livingstone, M., Finlayson, J., Flachon, V., …Longbottom, D. (2016)
Experimental challenge of pregnant cattle with the putative abortifacient Waddlia chondrophila. Scientific Reports, 6, 37150. https://doi.org/10.1038/srep37150
Waddlia chondrophila is a Gram-negative intracellular bacterial organism that is related to classical chlamydial species and has been implicated as a cause of abortion in catt...

Antiviral host defence peptides.

Book Chapter
Sousa, F. H., Casanova, V., Stevens, C., & Barlow, P. G. (2016)
Antiviral host defence peptides. In R. M. Epand (Ed.), Host Defense Peptides and Their Potential as Therapeutic Agents, 57-94. Springer Verlag. https://doi.org/10.1007/978-3-319-32949-9_3
The on going global mortality and morbidity associated with viral pathogens highlights the need for the continued development of effective, novel antiviral molecules. The anti...

Analysing the effect of soil organic matter on bacterial communities using T-RFLP fingerprinting: different methods, different stories?

Journal Article
Blaud, A., Diouf, F., Herrmann, A. M., & Lerch, T. Z. (2015)
Analysing the effect of soil organic matter on bacterial communities using T-RFLP fingerprinting: different methods, different stories?. Biology and Fertility of Soils, 51(8), 959-971. doi:10.1007/s00374-015-1041-0
Soil microbial ecology needs robust tools to elucidate ecological questions, such as the impact of fertilisation on soil microbial communities. However, the methods and data a...

Effect of Ozone Treatment on Inactivation of Escherichia coli and Listeria sp. on Spinach

Journal Article
Wani, S., Maker, J., Thompson, J., Barnes, J., & Singleton, I. (2015)
Effect of Ozone Treatment on Inactivation of Escherichia coli and Listeria sp. on Spinach. Agriculture, 5(2), 155-169. https://doi.org/10.3390/agriculture5020155
The efficacy of “gaseous” ozone in reducing numbers and re-growth of food-borne pathogens, (Escherichia coli and Listeria spp.), on leafy salads was investigated using spinach...

Dynamics of bacterial communities in relation to soil aggregate formation during the decomposition of 13C-labelled rice straw

Journal Article
Blaud, A., Lerch, T., Chevallier, T., Nunan, N., Chenu, C., & Brauman, A. (2012)
Dynamics of bacterial communities in relation to soil aggregate formation during the decomposition of 13C-labelled rice straw. Applied Soil Ecology, 53, 1-9. https://doi.org/10.1016/j.apsoil.2011.11.005
The addition of fresh organic matter is known to modify both microbial community structure and soil aggregation. The objective of this study was to understand the relationship...
34 results

The prevalence, sources and diversity of antibiotic resistant E. coli in Scottish surface waters: a baseline for risk assessment and intervention targets.

2022 - 2026
The alarming rise in resistance to antibiotics is now widely accepted as being one of the most serious public health crises we face today. The use and overuse of antibiotics in human and animal medici...
Funder: Medical Research Scotland | Value: £71,650

Tackling bottlenecks to the use of Johne’s Disease data and adding value to increase farmer and vet engagement in Johne’s disease control

2022 - 2023
Tackling bottlenecks to the use of Johne’s Disease data and adding value to increase farmer and vet engagement in Johne’s disease control
Funder: Biotechnology and Biological Sciences Research Council | Value: £24,699

Development of a scale-up process for production of Kombucha

2022 - 2023
Gut Feelings main commercial product is Kombucha, a fermented tea produced by natural microbial fermentation and assumed to contain a variety of microbes that link to health benefits. It is produced u...
Funder: Scottish Funding Council | Value: £4,960

Virulence of diverse Listeria monocytogenes strains in an invertebrate infection model

2022 - 2022
Listeria monocytogenes (L. monocytogenes) is a bacterium which is found throughout the environment and is the cause of listeriosis, a major food-borne disease. While annual case numbers are relatively...
Funder: Medical Research Scotland | Value: £2,160

Management of post-weaning diarrhoea and the implications for AMR in response to the upcoming ban on zinc supplementation in pigs

2022 - 2023
Management of post-weaning diarrhoea and the implications for AMR in response to the upcoming ban on zinc supplementation in pigs
Funder: Biotechnology and Biological Sciences Research Council | Value: £4,170

Quantifying AMR in the River Almond Catchment Area

2021 - 2025
Aim To Quantifying AMR Pollution and identify the major sources of point and diffuse AMR pollution in the River Almond Catchment Area in order to provide a baseline for future risk assessment and inte...
Funder: Natural Environment Research Council | Value: £52,080

Scotland-India Antimicrobial Resistance in the Environment Network (SIAMREN)

2020 - 2021
This project focuses upon the creation and growth of a network of researchers within Scotland and India who have common research interests in the challenges presented by the emergence of antimicrobial...
Funder: Royal Society of Edinburgh

The prevalence of antibiotic resistance pathogen E. coli in Scottish surface waters

2019 - 2023
The alarming rise in resistance to antibiotics is now widely accepted as being one of the most serious public health crises we face today. The use and overuse of antibiotics in human and animal medici...
Funder: Medical Research Scotland | Value: £129,161

The role of NamA in L. monocytogenes virulence gene expression

2019 - 2020
Student Placement Scholarship 2019. Provides up to 8 weeks of paid laboratory experience for an undergraduate student.
Funder: Society of Applied Microbiology | Value: £2,500

Design a smart system for pathogens detection in bathing waters

2019 - 2025
Monitoring the quality of recreational waters such as beaches and rivers is becoming a global concern to protect human health (e.g. the EU Bathing Water Directive (BWD) in Europe). In Scotland, water ...
Funder: Data Lab | Value: £38,822