Refactoring data transforms in MaTSE for flexibility.
Presentation / Conference
Craig, P., & Kennedy, J. (2009, October)
Refactoring data transforms in MaTSE for flexibility
In early prototypes of the Microarray Time-series Explorer
(MaTSE) data transforms were tightly coupled with visualisation components. While this allowed us to achieve our ini...
A framework for information visualisation
Journal Article
Kennedy, J., Mitchell, K., & Barclay, P. J. (1996)
A framework for information visualisation. SIGMOD record, 25, 30-34
In this paper we examine the issues involved in developing information visualisation systems and present a framework for their construction. The framework addresses the compon...
Using a metadata software layer in information systems integration.
Conference Proceeding
Roantree, M., Kennedy, J., & Barclay, P. J. (2001)
Using a metadata software layer in information systems integration. In Advanced systems engineering: CAiSE'01 - Software Engineering meets Information Systems Engineering (299-314). https://doi.org/10.1007/3-540-45341-5_20
A federated information system requires that multiple (often heterogenous) information systems are integrated to an extent that they can share data. This shared data often tak...
The minimum information about a genome sequence (MIGS) specification
Journal Article
Field, D., Garrity, G., Gray, T., Morrison, N., Selengut, J., Sterk, P., …Wipat, A. (2008)
The minimum information about a genome sequence (MIGS) specification. Nature Biotechnology, 26, 541-547. https://doi.org/10.1038/nbt1360
With the quantity of genomic data increasing at an exponential rate, it is imperative that these data be captured electronically, in a standard format. Standardization activit...
3D information visualisation: Identifying and measuring success
Conference Proceeding
Kennedy, J., Mitchell, K., Barclay, P., & Marshall, B. (1995)
3D information visualisation: Identifying and measuring success. In Proceedings of the 2nd International FADIVA Workshop, 1995
This paper presents some of our views on information visualisation and interfaces to databases with respect to the theme of the workshop.
Conceptual Modelling for Database User Interfaces
Conference Proceeding
Cooper, R., McKirdy, J., Griffiths, T., Barclay, P. J., Paton, N. W., Gray, P., …Goble, C. (2000)
Conceptual Modelling for Database User Interfaces. In H. Arisawa, & T. Catarci (Eds.), Advances in Visual Information Management. VDB 2000. IFIP — The International Federation for Information Processing (129-138). https://doi.org/10.1007/978-0-387-35504-7_9
Model-based user interface development environments show promise for improving the speed of production and quality user interfaces. Such systems usually have seperate descript...
A standard data model representation for taxonomic information.
Journal Article
Kennedy, J., Hyam, R., Kukla, R., & Paterson, T. (2006)
A standard data model representation for taxonomic information. OMICS, 10, 220-230. doi:10.1089/omi.2006.10.220
The names used by biologists to label the observations they make are imprecise. This is an issue as workers increasingly seek to exploit data gathered from multiple, unrelated...
Extending taxonomic visualisation to incorporate synonymy and structural markers.
Journal Article
Graham, M., & Kennedy, J. (2005)
Extending taxonomic visualisation to incorporate synonymy and structural markers. Information Visualization, 4, 206-223. https://doi.org/10.1057/palgrave.ivs.9500096
The visualisation of taxonomic hierarchies has evolved from indented lists of names to techniques that can display thousands of nodes and onto hundreds of thousands of nodes o...
Interoperable Services for Federations of Database System
Conference Proceeding
Roantree, M., Kennedy, J., & Barclay, P. J. (2002)
Interoperable Services for Federations of Database System. In A. Caplinskas, & J. Eder (Eds.), Advances in Databases and Information Systems: Fifth East-European Conference ADBIS' 2001
The problems associated with defining interoperable protocols for heterogenous information systems has been the subject of researchers for many years. While numerous solutions...
Coordinated graph and scatter-plot views for the visual exploration of microarray time-series data
Conference Proceeding
Craig, P., & Kennedy, J. (2003)
Coordinated graph and scatter-plot views for the visual exploration of microarray time-series data. In IEEE Symposium on Information Visualization, 173-180. doi:10.1109/infvis.2003.1249023
Microarrays are a relatively new, high-throughput data acquisition technology for investigating biological phenomena at the micro-level. The product of microarray experiments ...